Ah no prob, man. That's exactly what this forum is for. And the super low gain pre tubes don't necessarily allow you to run the power amp more open, because there's ultimately a lot less signal going to it, so you're probably not going to get as much power tube distortion in the long run, but for me, everything was a plus with the little experiment. I'm going to be recording in an apartment so the low volume, high articulation, great tone aspect is really the best. I just can't go back to that old tone. I tried with the AX back in the V3 position and everything just went to hell.
And about your amp: I hate to be a skeptic, but I wouldn't trust your amp again just yet. With all the trouble it gave you, I'd still keep my eye on it. If it acts up again, I'd say just give it back to Mesa and get a new amp. Let them sort it out. You've had enough trouble. Glad you're enjoying it again though. They're really great amps.
Also, is it just me, or has this problem been really prevalent lately? Seriously, like at least 2 other people have posted a thread about this! It always makes me nervous. Makes me feel like I'm next in line.