It's late at night here in sunny England and I assumed that your tone changes drastically with the loop engaged? There will be a difference in tone as another 2 tube stages are in the signal chain with the loop engaged. The typical tube buffered fx loop is designed to be as transparent as possible, but that's never the case, and some change in tone is going to happen. I've owned a Recto and engaging the loop does not change the tone too badly.
How is your tone affected with the loop, does it become more overdriven or looses some highs/lows etc? And what are you running in your loop? It's also possible that you're pedals are overdiven
How is your tone affected with the loop, does it become more overdriven or looses some highs/lows etc? And what are you running in your loop? It's also possible that you're pedals are overdiven